Literature

AuthorsYearsort descendingTitle
C. Lanave, Preparata, , G., Saccone, C., Serio, G.1984A new method for calculating evolutionary substitution rates
H. Kishino, Hasegawa M.1989Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
N. Goldman1990Maximum likelihood inference of phylogenetic trees, with special reference to a Poisson process model of DNA substitution and to parsimony analysis
D. Schluter, Price, T., Mooers, A. Ø., Ludwig, D.1997Likelihood of ancestor atates in adaptive radiation
N. Takezaki, Gojobori T.1999Correct and incorrect vertebrate phylogenies obtained by the entire mitochondrial DNA sequences
N. Goldman, Anderson, J. P., Rodrigo, A. G.2000Likelihood-based tests of topologies in phylogenetics
D. P. Faith, Trueman J. W. H.2001Towards an inclusive philosophy for phylogenetic inference
P. O. Lewis2001Phylogenetic systematics turns over a new leaf
P. O. Lewis2001A likelihood approach to estimating phylogeny from discrete morphological character data
L. Bromham, Woolfit, M., Lee, M. S. Y., Rambaut, A.2002Testing the relationship between morphological and molecular rates of change along phylogenies
S. Guindon, Gascuel O.2003A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
F. E. Anderson, Swofford D. L.2004Should we be worried about long-branch attraction in real data sets? Investigations using metazoan 18S rDNA
J. Sullivan, Abdo, Z., Joyce, P., Swofford, D. L.2005Evaluating the performance of a successive-approximations approach to parameter optimization in maximum-likelihood phylogeny estimation
G. Hunt2008Gradual or pulsed evolution: when should punctuational explanations be preferred?
Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith