@article {7840,
	title = {Congruence between phylogeny and stratigraphy: randomization tests and the gap excess ratio},
	journal = {Systematic Biology},
	volume = {48},
	number = {3},
	year = {1999},
	note = {PDF},
	pages = {559-580},
	keywords = {phylogenetics, stratigraphy},
	author = {Wills, Matthew A.}
}
@article {7809,
	title = {Fixed character states and the optimization of molecular sequence data},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	pages = {379-385},
	keywords = {alignment, phylogenetics, poy},
	author = {Wheeler, Ward}
}
@article {7814,
	title = {Measuring topological congruence by extending character techniques},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	note = {DO NOT HAVE},
	pages = {131{\textendash}135},
	keywords = {congruence, phylogenetics},
	author = {Wheeler, W. C.}
}
@article {7576,
	title = {Character coding and inapplicable data},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	note = {PDF},
	pages = {363{\textendash}371},
	keywords = {character coding, missing data, phylogenetics},
	author = {Strong, Ellen E. and Lipscomb, Diana}
}
@article {7563,
	title = {Diagnostic genetic markers and evolutionary relationships among invasive dreissenoid and corbiculoid bivalves in North America: phylogenetic signal from mitochondrial 16S rDNA},
	journal = {Molecular Phylogenetics and Evolution},
	volume = {13},
	number = {1},
	year = {1999},
	month = {October},
	pages = {31-49},
	keywords = {16S, bivalvia, corbiculoidea, dreissenoidea, mollusca, mtDNA, phylogenetics, phylogeny},
	author = {Stepien, Carol A. and Hubers, Allyson N. and Skidmore, Jennifer L.}
}
@article {7137,
	title = {The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies},
	journal = {Systematic Biology},
	volume = {48},
	year = {1999},
	note = {PDF},
	pages = {612-622},
	keywords = {maximum likelihood, phylogenetics, statistics},
	author = {Pagel, Mark}
}
@article {7138,
	title = {Inferring the historical patterns of biological evolution},
	journal = {Nature},
	volume = {401},
	year = {1999},
	note = {xerox},
	pages = {877-884},
	keywords = {comparative method, evolution, molecular characters, phylogenetics},
	author = {Pagel, Mark}
}
@article {7068,
	title = {The parsimony ratchet, a new method for rapid parsimony analysis},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	note = {PDF},
	pages = {407-414},
	keywords = {parsimony, phylogenetics, ratchet},
	author = {Nixon, Kevin C.}
}
@article {6618,
	title = {Homoplasy increases phylogenetic structure},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	note = {PDF},
	pages = {91{\textendash}93},
	keywords = {homoplasy, molecular characters, phylogenetics, saturation},
	author = {K{\"a}llersj{\"o}, M. and Albert, V. A. and Farris, J. S}
}
@article {6587,
	title = {Development, evolution, and corroboration},
	journal = {The Anatomical Record (New Anat.)},
	volume = {257},
	year = {1999},
	note = {xerox},
	pages = {6-14},
	keywords = {development, evodevo, evolution, ontogeny, phylogenetics},
	author = {Janies, Daniel and DeSalle, Rob}
}
@article {6355,
	title = {Analyzing large data sets in reasonable times: solutions for composite optima},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	note = {PDF},
	pages = {415-428},
	keywords = {phylogenetics, tree drifting, tree fusing},
	author = {Goloboff, Pablo A.}
}
@article {6325,
	title = {Corroboration among data sets in simultaneous analysis: hidden support for phylogenetic relationships among higher level artiodactyl taxa},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	note = {PDF},
	pages = {271-313},
	keywords = {combined data analyses, phylogenetics, support},
	author = {Gatesy, J. and O{\textquoteright}Grady, P. and Baker, Richard H.}
}
@article {6293,
	title = {Reconstructing phylogeny with and without temporal data},
	journal = {Science},
	volume = {284},
	year = {1999},
	note = {PDF},
	pages = {1816-1819},
	keywords = {paleontology, phylogenetics, stratigraphy},
	author = {Fox, David L. and Fisher, Daniel C. and Leighton, Lindsey R.}
}
@article {5870,
	title = {Are third positions really that bad? A test using vertebrate cytochrome b},
	journal = {Cladistics},
	volume = {15},
	number = {2},
	year = {1999},
	note = {PDF},
	pages = {191{\textendash}197},
	keywords = {molecular characters, phylogenetics, saturation},
	author = {Bj{\"o}rklund, M.}
}
@article {5838,
	title = {Assessing congruence between cladistic and stratigraphic data},
	journal = {Systematic Biology},
	volume = {48},
	number = {3},
	year = {1999},
	note = {PDF},
	pages = {581{\textendash}596},
	keywords = {paleontology, phylogenetics, stratigraphy},
	author = {Benton, Michael J. and Hitchin, Rebecca and Wills, Matthew A.}
}
@article {5729,
	title = {Congruence among mammalian mitochondrial genes},
	journal = {Cladistics},
	volume = {15},
	year = {1999},
	note = {PDF},
	pages = {75-84},
	keywords = {homoplasy, molecular characters, phylogenetics, saturation},
	author = {Allard, M. W. and Farris, J. S and Carpenter, J. M.}
}
