@article {7871,
	title = {An index of substitution saturation and its application},
	journal = {Molecular Phylogenetics and Evolution},
	volume = {26},
	year = {2003},
	note = {PDF},
	pages = {1-7},
	keywords = {molecular characters, phylogenetics, saturation},
	author = {Xia, Xuhua and Xie, Zheng and Salemi, Marco and Chen, Lu and Wang, Yong}
}
@article {7818,
	title = {Iterative pass optimization of sequence data},
	journal = {Cladistics},
	volume = {19},
	year = {2003},
	note = {PDF},
	pages = {254-260},
	keywords = {optimization, phylogenetics, poy},
	author = {Wheeler, Ward C.}
}
@article {7819,
	title = {Implied alignment: a synapomorphy-based multiple-sequence alignment method and its use in cladogram search},
	journal = {Cladistics},
	volume = {19},
	year = {2003},
	note = {PDF},
	pages = {261-268},
	keywords = {alignment, direct optimization, implied alignment, phylogenetics, poy},
	author = {Wheeler, Ward C.}
}
@article {7322,
	title = {Genome-scale approaches to resolving incongruence in molecular phylogenies},
	journal = {Nature},
	volume = {425},
	year = {2003},
	note = {PDF},
	month = {October 23},
	pages = {798-804},
	keywords = {genomics, phylogenetics, support},
	author = {Rokas, Antonis and Williams, Barry L. and King, Nicole and Carroll, Sean B.}
}
@article {7293,
	title = {Problematic issues of cladistics: 1. Ancestor recognition and phylogenetic classification},
	journal = {Neues Jahrbuch f{\"u}r Geologie und Pal{\"a}ontologie Abhandlungen},
	volume = {230},
	number = {1},
	year = {2003},
	month = {October},
	pages = {97-143},
	keywords = {cladistics, classification, paleontology, phylogenetics, taxonomy},
	author = {Reif, Wolf-Ernst}
}
@article {6936,
	title = {Molecular systematics of cowries (Gastropoda: Cypraeidae) and diversification patterns in the tropics},
	journal = {Biological Journal of the Linnean Society},
	volume = {79},
	year = {2003},
	note = {PDF},
	pages = {401-459},
	keywords = {biogeography, classification, diversification, gastropoda, molecular clock, molecules, phylogenetics, phylogeny, specialization, taxonomy},
	author = {Meyer, Christopher P.}
}
@article {6896,
	title = {Phylogenetic analysis of the subclass Pteriomorphia (Bivalvia) from mtDNA COI sequences},
	journal = {Molecular Phylogenetics and Evolution},
	volume = {27},
	year = {2003},
	note = {PDF},
	pages = {429-440},
	keywords = {bivalvia, CO1, mollusca, mtDNA, phylogenetics, phylogeny, Pterineidae, pteriomorphia},
	author = {Matsumoto, Masahiro}
}
@article {6804,
	title = {Phylogenetic comparative methods and the geography of speciation},
	journal = {Trends in Ecology and Evolution},
	volume = {18},
	number = {5},
	year = {2003},
	note = {PDF},
	pages = {220-227},
	keywords = {allopatry, biogeography, evolution, phylogenetics, speciation, sympatry},
	author = {Losos, Jonathan B. and Glor, Richard E.}
}
@article {6524,
	title = {[TITLE BLANK]},
	journal = {Nature Reviews Genetics},
	year = {2003},
	note = {PDF},
	keywords = {bayesian, maximum likelihood, phylogenetics},
	author = {Holder, Mark and Lewis, Paul O.}
}
@article {6420,
	title = {A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood},
	journal = {Systematic Biology},
	volume = {52},
	number = {5},
	year = {2003},
	note = {PDF},
	pages = {696-704},
	keywords = {likelihood, ML, phylogenetics, phyml},
	author = {Guindon, St{\'e}phane and Gascuel, Olivier}
}
@article {6389,
	title = {Data exploration in phylogenetic inference: scientific, heuristic, or neither},
	journal = {Cladistics},
	volume = {19},
	year = {2003},
	note = {PDF},
	pages = {379{\textendash}418},
	keywords = {philosophy, phylogenetics, sensitivity, stability, support},
	author = {Grant, Taran and Kluge, Arnold G.}
}
@article {6331,
	title = {A phylogeny of megachiropteran bats (Mammalia: Chiroptera: Pteropodidae) based on direct optimization analysis of one nuclear and four mitochondrial genes},
	journal = {Cladistics},
	volume = {19},
	year = {2003},
	note = {PDF},
	pages = {496-511},
	keywords = {bats, chiroptera, mammalia, molecules, phylogenetics, phylogeny, poy},
	author = {Giannini, Norberto P. and Simmons, Nancy B.}
}
@article {6302,
	title = {From basepairs to birdsongs: phylogenetic data in the age of genomics},
	journal = {Cladistics},
	volume = {19},
	year = {2003},
	note = {PDF},
	pages = {333-347},
	keywords = {genomics, hierarchy, morphology, phylogenetics},
	author = {Freudenstein, John V. and Pickett, Kurt M. and Simmons, Mark P. and Wenzel, John W.}
}
@article {5887,
	title = {Testing for equal rates of cladogenesis in diverse taxa},
	journal = {Evolution},
	volume = {57},
	number = {11},
	year = {2003},
	note = {PDF},
	pages = {2469{\textendash}2474},
	keywords = {macroevolution, maximum likelihood, molecular characters, phylogenetics, rates, speciation},
	author = {Bokma, Folmer}
}
@article {1386,
	title = {Phylogenetic analysis of the subclass Pteriomorphia (Bivalvia) from mtDNA COI sequences},
	journal = {Molecular Phylogenetics and Evolution},
	volume = {27},
	year = {2003},
	pages = {429-440},
	keywords = {bivalvia, CO1, mollusca, mtDNA, phylogenetics, phylogeny, pteriomorphia},
	issn = {1055-7903},
	doi = {10.1016/S1055-7903(03)00013-7},
	author = {Matsumoto, Masahiro}
}
